>htrA, dominio tripsina
psipredSS      EEEE--------CCCCEEEEEEEE--E------CCHH------------CEEEEEECCCC
query      145 EVAL--------SDGRRFQAKLVG--A------DPET------------DVAVVQIPPDH 176
1DLE_A      65 DD--KE-HSIKVSVGG-EKRDLEIevVLFHPNYNINGkkeagipefydYDVALIKLKNKL 120
1KY9_A     112 v---IK---VQLSDG--RKFDAKX---VG---KDPRS------------DIALIQIQNP- 144
gi 7531138 157 ----GDaYTVVLDDGTeLDAKLIG--------ADPRT------------DLAVLKINAP- 191
gi 1708339 152 AVvlDD--------GTeLNAKLIGt--------DPRT------------DLAVLKVNEK- 182
gi 497155  124 KValSD---GREFES---RILLRD-----------ET-----------TDLAVLKIEAK- 154
gi 2094850  97 NTvaDE---ISIEFANgKKLDAKIv------GTDPKT------------DIALLKVESK- 134
gi 1652463 196 EV------TVTLKDG--RSFPGRV------MGSDPST------------DVAVVKIEAG- 228
gi 1651868 136 VV-------VTLRDG--RTFDGQV------RGTDEVT------------DLAVVKIEPQ- 167

psipredSS      --------CCEEE----CCCCC-CCCCCCEEEEEEC---CCCCC------------CEEE
query      177 --------LVQAE----FGSAS-SLHVGDVVVAIGN---PFGLG------------QTAT 208
1DLE_A     121 KYGQTIRPICLPCtegtTRALRlPPTTTCQQQKEELlpaQDIKAlfvseeeKKLTRKEVY 180
1KY9_A     145 -KNLTAIKXADSD----------ALRVGDYTVAIGN---PFGLG---------ETVTSGI 181
gi 7531138 192 -KRKFV-YVAFGD-----DN---KVRVGDWVVAVGN---PFGLG---------GTVTSGI 229
gi 1708339 183 ---RKFSYVDFGD-----DSKL-RVG--DWVVAIGN---PFGLG---------GTVTAGI 219
gi 497155  155 -QQFPVLALGNSD----------EVEVGDLVLAIGN---PFGVG---------QTVTSGI 191
gi 2094850 135 EPLPFVSFGDSDT-----------MREGDWVMAMGNp-----LG----------QGFSTS 168
gi 1652463 229 ----DLPTVALGD-----SDHL-QVG--EWAIAIGNp-----LG-----------LDNTV 260
gi 1651868 168 --GSALPVAPLGT-----SSNL-QVG--DWAIAVGNp--VGLDN-------------TVT 202

psipredSS      EEEEE-C-CCCCC---CCCC---------CCCEEEEEEE-------ECCCCCCCCCEECC
query      209 MGIVS-A-LGRRA---VGSE---------GYEGFIQTDA-------STNPGNSGGALVSE 247
1DLE_A     181 IKNGDKKgSCERDaqyAPGYdkvkdisevVTPRFLCTGGVspYAdPNTCRGDSGGPLIVH 240
1KY9_A     182 VSALGRSgLNAEN-----------------YENFIQTDA-------AINRGNAGGALVNL 217
gi 7531138 230 VSARGRD-IGAGP-----------------YDDFIQIDA-------AVNKGNSGGPAFDL 264
gi 1708339 220 VSARGRD-IGTG-----------------VYDDFIQIDA-------AVNRGNSGGPTFDL 254
gi 497155  192 VSAQSRTqVGISDf-----------------DFFIQTDA-------AINPGNSGGALIDM 227
gi 2094850 169 VGIVSA----RNRe-lSGTY-----------DDCIQTDA-------AINRGNSGGPLFSM 205
gi 1652463 261 TTGILSA-TGRRSa-dIGVPd--------kRVEFIQTDA-------AINPGNSGGPLLNA 303
gi 1651868 203 LGIIST--LGRSAa-qAGIPd--------kRVEFIQTDA-------AINPGNSGGPLLNA 244

psipredSS      CC---CEEEEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHCCC
query      248 DG---VVVginsaiigpaggsigigfavpaetvgivmrqliltgkl 290
1DLE_A     241 KRsrfIQVGVISWGvvDVCKNQKRqkqvPAHARDFHinlfQVLPWL 286
1KY9_A     218 NG---ELIGINTAI--LAPDGGNIg---IGFAIPSN----XVKNLT 251
gi 7531138 265 SG---EVIGINTAI--FSPSGGSVg---IAFAIPSS----TAKQVV 298
gi 1708339 255 NG---KVVGVNTAI--FSPSGGNVg---IAFAIPAA----TANEVV 288
gi 497155  228 RG---RLIGINTAI--YSRSGGSVg---IGFAIPSN----MVRAVV 261
gi 2094850 206 DG---KVIGVNTAI--LSPNGG-------SIGIGFS----MASNVV 235
gi 1652463 304 DG---QVIGMNTAI--IQNAQG------IGFAIPIN----KAQEIA 334
gi 1651868 245 RG---EVIGINTAI--RADATG------IGFAIPID-----QAKAI 274


>hrtA, dominio PDZ
psipredSS       CCCEEEEEEHHHHHHHH--------CCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEC
query       293 GEVGILTQDLTPGLAKA--------FGIDEGAGALVSEVLPGSPAANAGIQPGDVIRMVD 344
1KY9_A      263 GELGIXGTELnselaka--------xkvdaqRGAFVSQVlpnSSAakaGIKAGDVITSln 314
gi 7404384  300 GFLGVTLQPIdselatc--------yklekvYGALVTDVvkgSPAekaGLRQEDVIVAyn 351
gi 17228197 320 PYLGIQMVGLtpqikqninsdpnsgltvdrdKGVLVVRVlpnSPAaraGLRAGDVIQKln 379
gi 21492942 293 GEVGILTQDLtpglaka--------fgidegAGALVSEVlpgSPAanaGIQPGDVIRMvd 344
gi 23001453 270 GLLGISSQDLtpelnqa--------fglehqHGSVVTRVtrgSAAqkaGLQAGDIITEvn 321
gi 23011110 270 GKLGVGIQDLtpdlaea--------lklgelRGAVIANIepgSPAeraGLQVGDVVTTvd 321
gi 23473206 325 VWLGVEGQDIdqrtgaw--------lglrgtGGMLVTRVyadTPAqkaGIQPGDVILRme 376
gi 30250256 292 GKIGVMIQEMtdelaes--------fnldksRGALVVSVekdGPAdkaGIKIRDVILRfd 343

psipredS        CEECCCHHHHHHHHHHCCCCCEEEEEEEEC--CEEEEEEE
query       345 GRTVRGASDVRRLVGSLPLQSKPSFQIDRA--SRRIEafp 382
1KY9_A      315 GKPISSFAALRAQVGtxpvgsKLTLGLLRd--GKQVNVNL 352
gi 7404384  352 GKEVESLSALRNAISlmmpgtRVVLKIVRe--GKTIEIPV 389
gi 17228197 380 GQAVTDASNVQRAVEnaqvggQLQLELWRn--GRNLNLAV 417
gi 21492942 345 GRTVRGASDVRRLVGslplqsKPSFQIDRa--SRRIEAFP 382
gi 23001453 322 GVAVRNAAHMRNLVGllrvgeAVQLTRLRd--GHSRTVKA 359
gi 23011110 322 GRPVHGATDLRNRIGltpagtAIRLAIKRg--DAEQTVSV 359
gi 23473206 377 NDTVQDKDHYLQLLRnhtrgrQLGLQIFRq--GELRRTAV 414
gi 30250256 344 GKGIDTSSDLPRIVGntkpdaRVSVEVWRngsVKKLTVTV 383

>yp086
psipred         SSC----CCCCEEEEECC-CHHHHHHHHHHHHCC-CEEEEEEECC-CHHHHHHHHHCCCE
query        74 AGE----GRTIGIYGFGA-AAHILVQVCKHRGQS-VyAFVLPGDE-AGRKFTLDLGAVWA 126
1KOL_A      181 AGVG-P-GSTVYVAGAGP-VGLAAAASARLLGAA-V-VIVGDLNP-ARLAHAKAQG-FEI 233
gi 3401952  170 WGAG-P-GKKVAVVGLGG-LGHMAVKIAH-ALGA-E-VTVLSQSL-RKKDDGLKLGaDHY 222
gi 12644382 174 HGLD-KpGMHIGVVGLGG-LGHVAVKFAK-AMGT-K-VTVISTSErKRDEAVTRLGaDAF 228
gi 3913182  175 FGLTnP-GLRGGILGLGG-VGHMGVKVAK-AMGH-H-VTVISSSSkKRAEAMDHLGaDAY 229
gi 6225005  169 TNVK-P-GQIVVLTGAGGgLGSFGIQYAK-AMGM-R-VVAVDHI--SKEDHCRNLGaEWF 221
gi 1168351  160 SGAR-P-GEWVAIYGIGG-LGHIALQYAK-AMGL-N-VVAVDISD-EKSKLAKDLGaDIA 212
gi 1781185  177 TELP-PgGR-LGLYGFGG-SAHITAQVALAQGAEiH-VMTRGAR---ARKLALQLG---- 225
gi 1184121  153 AQFs-VgKS-ILVLGGAGgVGSLVIQIAKHIFGA-S-KIAATGStgKLELFE-NLG-TDL 206

psipredSS       EEEC---CCCCCCCCCC------------EEEE----ECCCHHHHHHHHHHHHCCCEEE-
query       127 GFSG---EKPPVPLDAA------------IIFA----PAGELVPMALDVVRKGGTVVCG- 166
1KOL_A      234 ADLSldtPLHEQIAALLG-EP----EVDCAVDAvgfeARGHGHEGAKHEAPATVLNSLm- 287
gi 3401952  223 YAT----GDPRTFEELAGtFD----VILSTVS------APLDFGAYLALLRTEGTLVNv- 267
gi 12644382 229 LVS----RDPKQMKDAMGtMD----GIIDTVS------ATHPLLPLLGLLKNKGKLVMv- 273
gi 3913182  230 LVS----SDAAAMAAAADsLD----YIIDTVP------VHHPLEPYLALLKLDGKLVLl- 274
gi 6225005  222 VDAF---DTPDIVAHIRKlTnggahGVVSFAA------AKKPMEYALEYVRKRGTVVFv- 271
gi 1168351  213 INGL---KE-DPVKAIHDqVgg-vhAAISVAV------NKKAFEQAYQSVKRGGTLVVv- 260
gi 1781185  226 -------AASAQDAADRPpVPl---DAAILFAP-----VGDLVLPALEALDRGGILAIag 270
gi 1184121  207 PIDY---TKEN-FEELAEkFD-------VVYDA----VGQS--ERALKSVKEGGK----- 244

psipredSS       EE--EECCCCCCC-----------------------CCHHHHHCCEEEEEEEECC--HH-
query       167 GI--DMSDIPSMP-----------------------YRLLWGERRVVSVANLTRS--DG- 198
1KOL_A      288 QVTRVAGKIGIPGlyvtedpgavdaaakigslsirfGLGWAKSHSFHTGQTPVMKynRAL 347
gi 3401952  268 GAPE--EPVSLNL-----------------------FSLILGNRSIAGSAIGGIE----E 298
gi 12644382 274 GAPAEPLELPVF-------------------------PLIFGRKMVVGSMVGGIK----E 304
gi 3913182  275 GVIG--EPLSFVS-----------------------PMVMLGRKAITGSFIGSID----E 305
gi 6225005  272 GLPKD-GTIPLDT-----------------------LSLICNEITVKGSIVGSRM----D 303
gi 1168351  261 GLPN--ADLPIPI-----------------------FDTVLNGVSVKGSIVGTRK----D 291
gi 1781185  271 IHLTDIPDLNYQ------------------------QHLFQE-RQIRSVTSNTRA----D 301
gi 1184121  245 VVTIVAPATPPAI-----------------------PFLLTS---------------DGD 266

psipredSS       -----HHHHHH--HHHHHCCCEE-EEEEECHHHHHHHHHHHHCCCCEEEEEE
query       199 -----AEFFSI--GKAAGVRCFT-SVYPLEHANEALDDLRAGRVSGAAVIVP 242
1KOL_A      348 MQAIMWDRIN----IAEVVGVQV-IS--LDDAPRGYGEFDAGVP--KKFVID 390
gi 3401952  299 TQEMLDFCAVh---GLGAEIEVI-GAg-Q--VNEAYERVLASDVryRF-VID 342
gi 12644382 305 TQEMVDLAGKh---NITADIELI-SAd-Y--VNTAMERLAKADVkyRF-VID 348
gi 3913182  306 TAEVLQFCVDk---GLTSQIEVV-KMg-Y--VNEALERLERNDVryRF-VVD 349
gi 6225005  304 VDEAIDFITRg---IVHVPIELV-KLe-D--VPSVYQRMKDGKVtsRV-VVD 347
gi 1168351  292 MQEALDFAARg---KVRPIVETA-ELe-E--INEVFERMEKGKIngRI-VLK 335
gi 1781185  302 ARAFFDFAAQh---HIEVTTPEY-PLg---QADRALGDLSAGRIagAAVLLI 346
gi 1184121  267 LLEKLRPYLEngqvKP---ILDPkSPfpFSQTVEAFSYLKTNRAtgKVVIYP 315